feat(flatpak): support .flatpak bundle URLs; migrate autenticacao-gov-pt

Extend meta/flatpak.txt format to allow per-line URL for non-Flathub
.flatpak bundles. Lines are now either '<id>' (Flathub) or '<id>  <url>'
(downloaded + installed via 'flatpak install <file>'). Bundle entries
are skipped on pkg-apply/pkg-fix when already installed, and re-fetched
on flatpak-update only when the version embedded in the URL differs
from the installed version.

Use this to migrate Portuguese Citizen Card (pteid-mw) off the AUR
'autenticacao-gov-pt-bin' pseudo-flatpak unpack to the upstream-shipped
flatpak bundle from amagovpt/autenticacao.gov GitHub releases — same
codebase the AUR PKGBUILD already vendors, but properly sandboxed.

Refactors duplicated install logic in pkg-apply/pkg-fix into a private
_flatpak-install helper. ID-only contexts (pkg-status, undeclared,
pkg-list) now extract the first whitespace-separated token instead of
treating each line as a single ID.

Caveat: PKCS#11-based Citizen Card web auth in the LibreWolf flatpak
remains unsolved — the .so lives inside the autenticacao-gov sandbox
and would need a 'flatpak override' + 'modutil' bridge to be loaded
across sandboxes. The CLI/GUI eID app works as expected.

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